Description/Abstract
The data set contains the transcript annotations for the assembled IDT3 transcriptome. The trinotate annotation file provides an assembled transcript ID, gene name, how the gene was identified (the trinotate pipeline contains several methods of gene identification), and gene ontology information. The accompanying BAM alignment files contain the read mapping data for transcriptome samples used in the differential gene expression experiment. Raw read, BAM alignment and assembled IDT3 transcriptome data files are available from the NCBI SRA database as part of BioProject PRJNA934360.
Discipline/Subject
GEM3 Component
GEM3 Keywords
Other Keywords
- RNASeq
- annotations
- transcriptome
- annotations
- transcriptome
Research Site
External Affiliate(s)
Make available to
the public
Approved for public viewing
Yes
Data Available
WF submission id
379
Year Reported
Yr 5 (2022-23)