Agent-based models for redband trout

Submission information
Submission Number: 79
Created: Tue, 06/01/2021 - 13:50
Dataset General Information
Agent-based models for redband trout
Earth and related Environmental sciences, Biological sciences

Files for running early-stage agent-based models (ABM) to look at spatially-explicit patterns and mechanisms of adaptive capacity. Initial models have been focused on the streams in the Jack's Creek system. These models are run using python and CDmetaPOP. Models were run for 100 years under a variety of scenarios which incorporate numerous factors, such as individual dependent size and mortality. These models are easy to manipulate, and I am happy to work with individuals who wish to use these methods.

Attached files include in the inputs and example outputs from the 1-locus selection model. For python source codes, see Erin Landguth's GitHub. Note: expansions to CDmetaPOP are planner, and will be available through this website in the future.

Currently, models that have been run include demographic-only, climate change, and climate change with adaptation using a single locus model.

Dataset Key Terms
GEM3 Project Affiliation(s)
Internal Affiliation(s)
University of Idaho
Modeling
External Affiliation(s)
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Project Keywords
adaptation, adaptive capacity, agent-based models (ABM), climate change, demographics, ecology, fisheries science, hydrology, Oncorhynchus mykiss gairdneri (Redband Trout)
  • CDmetaPOP
  • population
  • future
  • distribution
Dataset Authors & Contact Information

Data Authors/Creators

Authors/Creators
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Contact Information

Dataset Contact Information
Travis Seaborn
tseaborn@uidaho.edu
Geographic and Temporal Information
Geographic Research Space
This project involves a research component conducted at field site(s) or collecting data from a target population within a specific geographic area, This project involves a research computing/modeling component conducted within research facilities
  • IBEST CRC, University of Idaho
Geographic Information
Jack's Creek watershed, southern Idaho (USA)
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GEM3 Research Sites
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Temporal Information
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Dataset Files & Links
Metadata Files
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Data Files
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Dataset Resources
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Administrative Submission Details
  • English
DOI Details
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Data Licensing & Availability
CC-BY-NC-SA | Creative Commons Attribution Non-Commercial Share-Alike
2019-11-29
Funding Information
NSF Idaho EPSCoR Program: Award OIA‐1757324
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